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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12926921 chr16:26369458 C/G C14orf138 chr14:50575350-50583297:- 0.37 6.14 2.11E-9 Box Plot
BLCA rs12931952 chr16:26370429 C/G C14orf138 chr14:50575350-50583297:- 0.36 5.97 5.57E-9 Box Plot
BLCA rs12932449 chr16:78916104 A/G FBLN2 chr3:13590631-13679922:+ 0.5 5.97 5.31E-9 Box Plot
BLCA rs12934295 chr16:26374241 G/T C14orf138 chr14:50575350-50583297:- 0.37 6.06 3.24E-9 Box Plot
BLCA rs12939357 chr17:18216013 C/A LOC162632 chr17:16614993-16707819:+ 0.38 6.03 3.87E-9 Box Plot
BLCA rs12939757 chr17:18230660 A/G LOC162632 chr17:16614993-16707819:+ 0.39 6.11 2.44E-9 Box Plot
BLCA rs12944702 chr17:71402744 A/G ATP5EP2 chr13:28519343-28519727:+ 0.33 5.99 4.91E-9 Box Plot
BLCA rs12944702 chr17:71402744 A/G POU2F1 chr1:167190066-167396582:+ 0.37 6.17 1.7E-9 Box Plot
BLCA rs12946752 chr17:18176423 C/T LOC162632 chr17:16614993-16707819:+ 0.44 7.29 1.74E-12 Box Plot
BLCA rs12949078 chr17:18215586 G/C LOC162632 chr17:16614993-16707819:+ 0.4 6.41 4.22E-10 Box Plot
BLCA rs12949983 chr17:18215858 G/A LOC162632 chr17:16614993-16707819:+ 0.38 6.03 3.87E-9 Box Plot
BLCA rs12952556 chr17:18231797 A/G LOC162632 chr17:16614993-16707819:+ 0.41 6.36 5.81E-10 Box Plot
BLCA rs12954483 chr18:52734527 A/G IQSEC1 chr3:12938719-13114617:- -0.53 -6.24 1.17E-9 Box Plot
BLCA rs12999430 chr2:70306785 C/G C1orf115 chr1:220863187-220872499:+ 0.43 6.01 4.28E-9 Box Plot
BLCA rs13013575 chr2:7695234 T/G KATNA1 chr6:149916009-149970108:- -0.3 -5.98 5.03E-9 Box Plot